IL_9N6W_053
3D structure
- PDB id
- 9N6W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU processome maturation and disassembly, State A*
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- GAG*CGAGGAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N6W_053 not in the Motif Atlas
- Homologous match to IL_9PN5_168
- Geometric discrepancy: 0.1471
- The information below is about IL_9PN5_168
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_02511.3
- Basepair signature
- cWW-tSH-L-cWW-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
9N6W|1|L1|G|514
9N6W|1|L1|A|515
9N6W|1|L1|G|516
*
9N6W|1|L1|C|536
9N6W|1|L1|G|537
9N6W|1|L1|A|538
9N6W|1|L1|G|539
9N6W|1|L1|G|540
9N6W|1|L1|A|541
9N6W|1|L1|A|542
9N6W|1|L1|C|543
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain L9
- 40S ribosomal protein S9-A
- Chain NB
- Something about silencing protein 10
- Chain SI
- Ribosome biogenesis protein BMS1
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