IL_9N6W_063
3D structure
- PDB id
- 9N6W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU processome maturation and disassembly, State A*
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- GUAU*AGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N6W_063 not in the Motif Atlas
- Homologous match to IL_9PN5_186
- Geometric discrepancy: 0.1072
- The information below is about IL_9PN5_186
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.5
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 42
Unit IDs
9N6W|1|L1|G|885
9N6W|1|L1|U|886
9N6W|1|L1|A|887
9N6W|1|L1|U|888
*
9N6W|1|L1|A|924
9N6W|1|L1|G|925
9N6W|1|L1|A|926
9N6W|1|L1|C|927
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain NG
- 40S ribosomal protein S14-A
- Chain NK
- KRR1 small subunit processome component
- Chain NM
- Small ribosomal subunit protein eS1A
Coloring options: