IL_9N6W_066
3D structure
- PDB id
- 9N6W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU processome maturation and disassembly, State A*
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- GACUA*UUAC
- Length
- 9 nucleotides
- Bulged bases
- 9N6W|1|L1|A|1036
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N6W_066 not in the Motif Atlas
- Geometric match to IL_8OI5_044
- Geometric discrepancy: 0.2568
- The information below is about IL_8OI5_044
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71194.5
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 43
Unit IDs
9N6W|1|L1|G|1035
9N6W|1|L1|A|1036
9N6W|1|L1|C|1037
9N6W|1|L1|U|1038
9N6W|1|L1|A|1039
*
9N6W|1|L1|U|1079
9N6W|1|L1|U|1080
9N6W|1|L1|A|1081
9N6W|1|L1|C|1082
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain LE
- 40S ribosomal protein S22-A
- Chain LU
- Protein SOF1
- Chain NE
- Protein FAF1
- Chain SL
- rRNA-processing protein FCF1
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