3D structure

PDB id
9N6X (explore in PDB, NAKB, or RNA 3D Hub)
Description
SSU processome maturation and disassembly, State B
Experimental method
ELECTRON MICROSCOPY
Resolution
3.71 Å

Loop

Sequence
GGUAUAAC*GCUAAUAC
Length
16 nucleotides
Bulged bases
9N6X|1|L1|U|144, 9N6X|1|L1|U|170
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9N6X|1|L1|G|142
9N6X|1|L1|G|143
9N6X|1|L1|U|144
9N6X|1|L1|A|145
9N6X|1|L1|U|146
9N6X|1|L1|A|147
9N6X|1|L1|A|148
9N6X|1|L1|C|149
*
9N6X|1|L1|G|165
9N6X|1|L1|C|166
9N6X|1|L1|U|167
9N6X|1|L1|A|168
9N6X|1|L1|A|169
9N6X|1|L1|U|170
9N6X|1|L1|A|171
9N6X|1|L1|C|172

Current chains

Chain L1
18S rRNA

Nearby chains

Chain L6
40S ribosomal protein S6-A
Chain LF
40S ribosomal protein S24-A
Chain LV
Ribosome biogenesis protein ENP2
Chain SP
U3 small nucleolar RNA-associated protein 20

Coloring options:

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