IL_9N6Y_015

3D structure

PDB id

9N6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CC*GUG

Length

5 nucleotides

Bulged bases

9N6Y|1|L0|U|382

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9N6Y_015 not in the Motif Atlas

Geometric match to IL_9E6Q_048

Geometric discrepancy: 0.2299

The information below is about IL_9E6Q_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_97561.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

9N6Y|1|L0|C|342
9N6Y|1|L0|C|343
*
9N6Y|1|L0|G|381
9N6Y|1|L0|U|382
9N6Y|1|L0|G|383

Current chains

Chain L0

5'ETS rRNA

Nearby chains

Chain LW

U3 small nucleolar RNA-associated protein 7

Chain NA

U3 small nucleolar RNA-associated protein MPP10

Chain NE

Protein FAF1

Chain SS

U3 small nucleolar RNA-associated protein 14