IL_9N6Y_016
3D structure
- PDB id
- 9N6Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU processome maturation and disassembly, State C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- GUUG*CUUC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N6Y_016 not in the Motif Atlas
- Geometric match to IL_8P9A_355
- Geometric discrepancy: 0.1047
- The information below is about IL_8P9A_355
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71194.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
9N6Y|1|L0|G|346
9N6Y|1|L0|U|347
9N6Y|1|L0|U|348
9N6Y|1|L0|G|349
*
9N6Y|1|L0|C|375
9N6Y|1|L0|U|376
9N6Y|1|L0|U|377
9N6Y|1|L0|C|378
Current chains
- Chain L0
- 5'ETS rRNA
Nearby chains
- Chain LW
- U3 small nucleolar RNA-associated protein 7
- Chain NE
- Protein FAF1
- Chain NK
- KRR1 small subunit processome component
- Chain SS
- U3 small nucleolar RNA-associated protein 14
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