IL_9N70_027

3D structure

PDB id

9N70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State E

Experimental method

ELECTRON MICROSCOPY

Resolution

5.17 Å

Loop

Sequence

UA*UAA

Length

5 nucleotides

Bulged bases

9N70|1|L1|A|505

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9N70_027 not in the Motif Atlas

Geometric match to IL_1CSL_002

Geometric discrepancy: 0.3025

The information below is about IL_1CSL_002

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

188

Unit IDs

9N70|1|L1|U|482
9N70|1|L1|A|483
*
9N70|1|L1|U|504
9N70|1|L1|A|505
9N70|1|L1|A|506

Current chains

Chain L1

18S rRNA

Nearby chains