IL_9N73_028

3D structure

PDB id

9N73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State G

Experimental method

ELECTRON MICROSCOPY

Resolution

5.96 Å

Loop

Sequence

GGCAAGUC*GCAGCCGCGGUAAUUCC

Length

25 nucleotides

Bulged bases

9N73|1|L1|A|556, 9N73|1|L1|C|572, 9N73|1|L1|C|573, 9N73|1|L1|G|574, 9N73|1|L1|A|579

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N73|1|L1|G|552
9N73|1|L1|G|553
9N73|1|L1|C|554
9N73|1|L1|A|555
9N73|1|L1|A|556
9N73|1|L1|G|557
9N73|1|L1|U|558
9N73|1|L1|C|559
*
9N73|1|L1|G|568
9N73|1|L1|C|569
9N73|1|L1|A|570
9N73|1|L1|G|571
9N73|1|L1|C|572
9N73|1|L1|C|573
9N73|1|L1|G|574
9N73|1|L1|C|575
9N73|1|L1|G|576
9N73|1|L1|G|577
9N73|1|L1|U|578
9N73|1|L1|A|579
9N73|1|L1|A|580
9N73|1|L1|U|581
9N73|1|L1|U|582
9N73|1|L1|C|583
9N73|1|L1|C|584

Current chains

Chain L1

18S rRNA

Nearby chains

Chain NA

U3 small nucleolar RNA-associated protein MPP10

Chain NB

Something about silencing protein 10

Chain SI

Ribosome biogenesis protein BMS1

Chain SR

40S ribosomal protein S23-A

Chain SY

U3 small nucleolar RNA-associated protein 11