IL_9N75_009
3D structure
- PDB id
- 9N75 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU processome maturation and disassembly, State I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- GGUAUAAC*GCUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 9N75|1|L1|U|144, 9N75|1|L1|U|170
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N75_009 not in the Motif Atlas
- Homologous match to IL_9H3G_165
- Geometric discrepancy: 0.1026
- The information below is about IL_9H3G_165
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_24485.3
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 4
Unit IDs
9N75|1|L1|G|142
9N75|1|L1|G|143
9N75|1|L1|U|144
9N75|1|L1|A|145
9N75|1|L1|U|146
9N75|1|L1|A|147
9N75|1|L1|A|148
9N75|1|L1|C|149
*
9N75|1|L1|G|165
9N75|1|L1|C|166
9N75|1|L1|U|167
9N75|1|L1|A|168
9N75|1|L1|A|169
9N75|1|L1|U|170
9N75|1|L1|A|171
9N75|1|L1|C|172
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain L6
- 40S ribosomal protein S6-A
- Chain LF
- 40S ribosomal protein S24-A
- Chain SP
- U3 small nucleolar RNA-associated protein 20
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