IL_9N77_001

3D structure

PDB id

9N77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State K

Experimental method

ELECTRON MICROSCOPY

Resolution

3.94 Å

Loop

Sequence

AG*CGU

Length

5 nucleotides

Bulged bases

9N77|1|L0|G|63

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9N77_001 not in the Motif Atlas

Geometric match to IL_8TSV_002

Geometric discrepancy: 0.2821

The information below is about IL_8TSV_002

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

9N77|1|L0|A|17
9N77|1|L0|G|18
*
9N77|1|L0|C|62
9N77|1|L0|G|63
9N77|1|L0|U|64

Current chains

Chain L0

5'ETS rRNA

Nearby chains

Chain LH

NET1-associated nuclear protein 1