IL_9N78_053
3D structure
- PDB id
- 9N78 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU processome maturation and disassembly, State L
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.17 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 9N78|1|L1|C|1158, 9N78|1|L1|C|1159
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N78_053 not in the Motif Atlas
- Homologous match to IL_9H3G_212
- Geometric discrepancy: 0.2636
- The information below is about IL_9H3G_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.15
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 24
Unit IDs
9N78|1|L1|A|1157
9N78|1|L1|C|1158
9N78|1|L1|C|1159
9N78|1|L1|A|1160
*
9N78|1|L1|U|1617
9N78|1|L1|C|1618
9N78|1|L1|C|1619
9N78|1|L1|C|1620
9N78|1|L1|U|1621
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain L5
- 40S ribosomal protein S5
- Chain LC
- 40S ribosomal protein S16-A
- Chain LG
- 40S ribosomal protein S28-A
- Chain SM
- U3 small nucleolar ribonucleoprotein protein IMP4
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