IL_9N79_004
3D structure
- PDB id
- 9N79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU processome maturation and disassembly, State M
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.93 Å
Loop
- Sequence
- UCUAAG*CUG
- Length
- 9 nucleotides
- Bulged bases
- 9N79|1|L1|U|60
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N79_004 not in the Motif Atlas
- Homologous match to IL_9PN5_147
- Geometric discrepancy: 0.0826
- The information below is about IL_9PN5_147
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61299.9
- Basepair signature
- cWW-cWH-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
9N79|1|L1|U|58
9N79|1|L1|C|59
9N79|1|L1|U|60
9N79|1|L1|A|61
9N79|1|L1|A|62
9N79|1|L1|G|63
*
9N79|1|L1|C|87
9N79|1|L1|U|88
9N79|1|L1|G|89
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain L4
- 40S ribosomal protein S4-A
- Chain L6
- 40S ribosomal protein S6-A
- Chain LF
- 40S ribosomal protein S24-A
- Chain SP
- U3 small nucleolar RNA-associated protein 20
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