3D structure

PDB id
9N7A (explore in PDB, NAKB, or RNA 3D Hub)
Description
SSU processome maturation and disassembly, State N
Experimental method
ELECTRON MICROSCOPY
Resolution
3.84 Å

Loop

Sequence
CGA*UCUUUGG
Length
10 nucleotides
Bulged bases
9N7A|1|L1|C|1096, 9N7A|1|L1|U|1097, 9N7A|1|L1|G|1100
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9N7A|1|L1|C|1034
9N7A|1|L1|G|1035
9N7A|1|L1|A|1036
*
9N7A|1|L1|U|1095
9N7A|1|L1|C|1096
9N7A|1|L1|U|1097
9N7A|1|L1|U|1098
9N7A|1|L1|U|1099
9N7A|1|L1|G|1100
9N7A|1|L1|G|1101

Current chains

Chain L1
18S rRNA

Nearby chains

Chain LD
40S ribosomal protein S11-A
Chain LE
40S ribosomal protein S22-A
Chain NF
40S ribosomal protein S13
Chain SL
rRNA-processing protein FCF1
Chain SR
40S ribosomal protein S23-A
Chain SS
U3 small nucleolar RNA-associated protein 14

Coloring options:

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