IL_9N7B_032

3D structure

PDB id

9N7B (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State O

Experimental method

ELECTRON MICROSCOPY

Resolution

3.25 Å

Loop

Sequence

CGG*CGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9N7B_032 not in the Motif Atlas

Homologous match to IL_9PN5_177

Geometric discrepancy: 0.2552

The information below is about IL_9PN5_177

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_19025.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

36

Unit IDs

9N7B|1|L1|C|646
9N7B|1|L1|G|647
9N7B|1|L1|G|648
*
9N7B|1|L1|C|686
9N7B|1|L1|G|687
9N7B|1|L1|G|688

Current chains

Chain L1

18S rRNA

Nearby chains

Chain LE

40S ribosomal protein S22-A