IL_9N7B_053
3D structure
- PDB id
- 9N7B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU processome maturation and disassembly, State O
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.25 Å
Loop
- Sequence
- CCU*GCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N7B_053 not in the Motif Atlas
- Homologous match to IL_9PN5_198
- Geometric discrepancy: 0.2188
- The information below is about IL_9PN5_198
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.7
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 240
Unit IDs
9N7B|1|L1|C|1173
9N7B|1|L1|C|1174
9N7B|1|L1|U|1175
*
9N7B|1|L1|G|1464
9N7B|1|L1|C|1465
9N7B|1|L1|G|1466
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain SI
- Ribosome biogenesis protein BMS1
- Chain SM
- U3 small nucleolar ribonucleoprotein protein IMP4
- Chain ST
- Nucleolar complex protein 14
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