IL_9N9J_015

3D structure

PDB id

9N9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUGAAAC*GUGGAUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N9J|1|L5|G|415
9N9J|1|L5|U|416
9N9J|1|L5|G|417
9N9J|1|L5|A|418
9N9J|1|L5|A|419
9N9J|1|L5|A|420
9N9J|1|L5|C|421
*
9N9J|1|L8|G|13
9N9J|1|L8|U|14
9N9J|1|L8|G|15
9N9J|1|L8|G|16
9N9J|1|L8|A|17
9N9J|1|L8|U|18
9N9J|1|L8|C|19

Current chains

Chain L5

28S ribosomal RNA

Chain L8

5.8S ribosomal RNA

Nearby chains

Chain LC

Large ribosomal subunit protein uL4

Chain LP

Large ribosomal subunit protein uL22

Chain Le

Large ribosomal subunit protein eL32