IL_9N9J_064

3D structure

PDB id

9N9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUCUUGG*UCAAC

Length

12 nucleotides

Bulged bases

9N9J|1|L5|U|1757

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N9J|1|L5|G|1753
9N9J|1|L5|U|1754
9N9J|1|L5|C|1755
9N9J|1|L5|U|1756
9N9J|1|L5|U|1757
9N9J|1|L5|G|1758
9N9J|1|L5|G|1759
*
9N9J|1|L5|U|1773
9N9J|1|L5|C|1774
9N9J|1|L5|A|1775
9N9J|1|L5|A|1776
9N9J|1|L5|C|1777

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LD

Large ribosomal subunit protein uL18

Chain LI

Ribosomal protein uL16-like

Chain u3

Transfer RNA; tRNA