IL_9N9J_104

3D structure

PDB id

9N9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGGUC*GGCGCCUAGC

Length

15 nucleotides

Bulged bases

9N9J|1|L5|G|2902, 9N9J|1|L5|G|2903, 9N9J|1|L5|G|3590, 9N9J|1|L5|U|3595, 9N9J|1|L5|A|3596

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N9J|1|L5|G|2901
9N9J|1|L5|G|2902
9N9J|1|L5|G|2903
9N9J|1|L5|U|2904
9N9J|1|L5|C|2905
*
9N9J|1|L5|G|3589
9N9J|1|L5|G|3590
9N9J|1|L5|C|3591
9N9J|1|L5|G|3592
9N9J|1|L5|C|3593
9N9J|1|L5|C|3594
9N9J|1|L5|U|3595
9N9J|1|L5|A|3596
9N9J|1|L5|G|3597
9N9J|1|L5|C|3598

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LR

Large ribosomal subunit protein eL19