IL_9NDP_104

3D structure

PDB id

9NDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GGAAGUCGG*CUGUC

Length

14 nucleotides

Bulged bases

9NDP|1|5|G|3839

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NDP|1|5|G|2847
9NDP|1|5|G|2848
9NDP|1|5|A|2849
9NDP|1|5|A|2850
9NDP|1|5|G|2851
9NDP|1|5|U|2852
9NDP|1|5|C|2853
9NDP|1|5|G|2854
9NDP|1|5|G|2855
*
9NDP|1|5|C|3837
9NDP|1|5|U|3838
9NDP|1|5|G|3839
9NDP|1|5|U|3840
9NDP|1|5|C|3841

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain V

Ribosomal protein L23