IL_9NDP_152

3D structure

PDB id

9NDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

CGGAGCC*GGAACCUG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NDP|1|5|C|4739
9NDP|1|5|G|4740
9NDP|1|5|G|4743
9NDP|1|5|A|4744
9NDP|1|5|G|4745
9NDP|1|5|C|4746
9NDP|1|5|C|4747
*
9NDP|1|5|G|4953
9NDP|1|5|G|4954
9NDP|1|5|A|4955
9NDP|1|5|A|4956
9NDP|1|5|C|4957
9NDP|1|5|C|4958
9NDP|1|5|U|4959
9NDP|1|5|G|4960

Current chains

Chain 5

28S rRNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain f

eL33