IL_9NDP_184

3D structure

PDB id

9NDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

9NDP|1|K|C|142, 9NDP|1|K|U|143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NDP|1|K|G|130
9NDP|1|K|U|140
9NDP|1|K|A|141
9NDP|1|K|C|142
9NDP|1|K|U|143
9NDP|1|K|U|144
*
9NDP|1|K|A|175
9NDP|1|K|U|176
9NDP|1|K|G|177
9NDP|1|K|C|178
9NDP|1|K|C|179
9NDP|1|K|G|180
9NDP|1|K|A|181
9NDP|1|K|C|182

Current chains

Chain K

18S rRNA

Nearby chains

Chain z

40S ribosomal protein S6