IL_9NDP_185

3D structure

PDB id

9NDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

9NDP|1|K|U|172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NDP|1|K|G|145
9NDP|1|K|G|146
9NDP|1|K|A|147
9NDP|1|K|U|148
9NDP|1|K|A|149
9NDP|1|K|A|150
9NDP|1|K|C|151
*
9NDP|1|K|G|167
9NDP|1|K|C|168
9NDP|1|K|U|169
9NDP|1|K|A|170
9NDP|1|K|A|171
9NDP|1|K|U|172
9NDP|1|K|A|173
9NDP|1|K|C|174

Current chains

Chain K

18S rRNA

Nearby chains

Chain NN

Small ribosomal subunit protein eS24

Chain W

eL24

Chain z

40S ribosomal protein S6