IL_9NDP_194
3D structure
- PDB id
- 9NDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GGG*CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 9NDP|1|K|U|428
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NDP_194 not in the Motif Atlas
- Homologous match to IL_9H3G_175
- Geometric discrepancy: 0.3561
- The information below is about IL_9H3G_175
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93336.3
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
9NDP|1|K|G|411
9NDP|1|K|G|412
9NDP|1|K|G|413
*
9NDP|1|K|C|424
9NDP|1|K|G|425
9NDP|1|K|A|426
9NDP|1|K|U|427
9NDP|1|K|U|428
9NDP|1|K|C|429
Current chains
- Chain K
- 18S rRNA
Nearby chains
- Chain DD
- Ribosomal protein S9 (Predicted)
- Chain VV
- uS12
- Chain x
- eS4
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