IL_9NDP_209

3D structure

PDB id

9NDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

CGUAG*UCAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NDP|1|K|C|676
9NDP|1|K|G|677
9NDP|1|K|U|678
9NDP|1|K|A|679
9NDP|1|K|G|680
*
9NDP|1|K|U|1025
9NDP|1|K|C|1026
9NDP|1|K|A|1027
9NDP|1|K|A|1028
9NDP|1|K|G|1029

Current chains

Chain K

18S rRNA

Nearby chains

Chain 5

Large subunit ribosomal RNA; LSU rRNA

Chain EE

Ribosomal protein S11

Chain QQ

Ribosomal protein S13

Chain TT

Ribosomal protein S15a

Chain VV

uS12