IL_9NDP_264
3D structure
- PDB id
- 9NDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- CGGAU*AGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NDP_264 not in the Motif Atlas
- Homologous match to IL_9H3G_243
- Geometric discrepancy: 0.1323
- The information below is about IL_9H3G_243
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.4
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 26
Unit IDs
9NDP|1|K|C|1742
9NDP|1|K|G|1743
9NDP|1|K|G|1744
9NDP|1|K|A|1745
9NDP|1|K|U|1746
*
9NDP|1|K|A|1788
9NDP|1|K|G|1789
9NDP|1|K|A|1790
9NDP|1|K|A|1791
9NDP|1|K|G|1792
Current chains
- Chain K
- 18S rRNA
Nearby chains
- Chain CC
- 40S ribosomal protein S8
- Chain W
- eL24
- Chain z
- 40S ribosomal protein S6
Coloring options: