IL_9NJV_053
3D structure
- PDB id
- 9NJV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S initiation complex (bL33 absent)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAG*CUAAG
- Length
- 10 nucleotides
- Bulged bases
- 9NJV|1|R1|A|1420
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NJV_053 not in the Motif Atlas
- Homologous match to IL_5J7L_295
- Geometric discrepancy: 0.2256
- The information below is about IL_5J7L_295
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_38507.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
9NJV|1|R1|C|1417
9NJV|1|R1|G|1418
9NJV|1|R1|A|1419
9NJV|1|R1|A|1420
9NJV|1|R1|G|1421
*
9NJV|1|R1|C|1577
9NJV|1|R1|U|1578
9NJV|1|R1|A|1579
9NJV|1|R1|A|1580
9NJV|1|R1|G|1581
Current chains
- Chain R1
- 23S ribosomal RNA
Nearby chains
No other chains within 10Å
Coloring options: