IL_9NJV_065
3D structure
- PDB id
- 9NJV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S initiation complex (bL33 absent)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAACUAGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NJV_065 not in the Motif Atlas
- Geometric match to IL_4WF9_117
- Geometric discrepancy: 0.0993
- The information below is about IL_4WF9_117
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22854.4
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 7
Unit IDs
9NJV|1|R1|G|1666
9NJV|1|R1|G|1667
9NJV|1|R1|A|1668
9NJV|1|R1|A|1669
9NJV|1|R1|C|1670
9NJV|1|R1|U|1671
9NJV|1|R1|A|1672
9NJV|1|R1|G|1673
9NJV|1|R1|G|1674
*
9NJV|1|R1|C|1990
9NJV|1|R1|U|1991
9NJV|1|R1|G|1992
9NJV|1|R1|U|1993
9NJV|1|R1|C|1994
Current chains
- Chain R1
- 23S ribosomal RNA
Nearby chains
- Chain 14
- 50S ribosomal protein L14
- Chain 3
- 50S ribosomal protein L3
Coloring options: