IL_9NJV_085

3D structure

PDB id

9NJV (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex (bL33 absent)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AACAUUGA*UUGAUGUU

Length

16 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NJV|1|R1|A|2094
9NJV|1|R1|A|2095
9NJV|1|R1|C|2096
9NJV|1|R1|A|2097
9NJV|1|R1|U|2098
9NJV|1|R1|U|2099
9NJV|1|R1|G|2100
9NJV|1|R1|A|2101
*
9NJV|1|R1|U|2188
9NJV|1|R1|U|2189
9NJV|1|R1|G|2190
9NJV|1|R1|A|2191
9NJV|1|R1|U|2192
9NJV|1|R1|G|2193
9NJV|1|R1|U|2194
9NJV|1|R1|U|2195

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 9

Large ribosomal subunit protein bL9