IL_9NJV_099

3D structure

PDB id

9NJV (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex (bL33 absent)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUC*GGUACG

Length

10 nucleotides

Bulged bases

9NJV|1|R1|A|2572, 9NJV|1|R1|C|2573

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NJV|1|R1|C|2512
9NJV|1|R1|A|2513
9NJV|1|R1|U|2514
9NJV|1|R1|C|2515
*
9NJV|1|R1|G|2569
9NJV|1|R1|G|2570
9NJV|1|R1|U|2571
9NJV|1|R1|A|2572
9NJV|1|R1|C|2573
9NJV|1|R1|G|2574

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 13

Large ribosomal subunit protein uL13

Chain 3

50S ribosomal protein L3