IL_9NJV_125

3D structure

PDB id

9NJV (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex (bL33 absent)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAAC*GUGC

Length

9 nucleotides

Bulged bases

9NJV|1|R3|A|130

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NJV|1|R3|G|128
9NJV|1|R3|A|129
9NJV|1|R3|A|130
9NJV|1|R3|A|131
9NJV|1|R3|C|132
*
9NJV|1|R3|G|230
9NJV|1|R3|U|231
9NJV|1|R3|G|232
9NJV|1|R3|C|233

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain sp

Small ribosomal subunit protein bS16

Chain sq

Small ribosomal subunit protein uS17

Chain st

30S ribosomal protein S20