IL_9NJV_135
3D structure
- PDB id
- 9NJV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S initiation complex (bL33 absent)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGAAGAAG*UGUAAAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NJV_135 not in the Motif Atlas
- Homologous match to IL_5J7L_020
- Geometric discrepancy: 0.1174
- The information below is about IL_5J7L_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28026.3
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
9NJV|1|R3|U|409
9NJV|1|R3|G|410
9NJV|1|R3|A|411
9NJV|1|R3|A|412
9NJV|1|R3|G|413
9NJV|1|R3|A|414
9NJV|1|R3|A|415
9NJV|1|R3|G|416
*
9NJV|1|R3|U|427
9NJV|1|R3|G|428
9NJV|1|R3|U|429
9NJV|1|R3|A|430
9NJV|1|R3|A|431
9NJV|1|R3|A|432
9NJV|1|R3|G|433
Current chains
- Chain R3
- 16S ribosomal RNA
Nearby chains
- Chain sd
- 30S ribosomal protein S4
Coloring options: