IL_9NJV_165

3D structure

PDB id

9NJV (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex (bL33 absent)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCAGCGG*CCGGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NJV|1|R3|C|1128
9NJV|1|R3|C|1129
9NJV|1|R3|A|1130
9NJV|1|R3|G|1131
9NJV|1|R3|C|1132
9NJV|1|R3|G|1133
9NJV|1|R3|G|1134
*
9NJV|1|R3|C|1140
9NJV|1|R3|C|1141
9NJV|1|R3|G|1142
9NJV|1|R3|G|1143
9NJV|1|R3|G|1144

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain si

Small ribosomal subunit protein uS9

Chain sj

30S ribosomal protein S10