IL_9NKL_021
3D structure
- PDB id
- 9NKL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 9NKL|1|R1|G|776, 9NKL|1|R1|A|788, 9NKL|1|R1|A|789, 9NKL|1|R1|U|790
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NKL_021 not in the Motif Atlas
- Geometric match to IL_5J7L_265
- Geometric discrepancy: 0.0762
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
9NKL|1|R1|G|775
9NKL|1|R1|G|776
9NKL|1|R1|G|777
*
9NKL|1|R1|C|787
9NKL|1|R1|A|788
9NKL|1|R1|A|789
9NKL|1|R1|U|790
9NKL|1|R1|C|791
Current chains
- Chain R1
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L2
- Chain 22
- Large ribosomal subunit protein uL22
- Chain 34
- 50S ribosomal protein L34
Coloring options: