IL_9NL5_063
3D structure
- PDB id
- 9NL5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGAACUAGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NL5_063 not in the Motif Atlas
- Geometric match to IL_5J7L_386
- Geometric discrepancy: 0.0536
- The information below is about IL_5J7L_386
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22854.4
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 7
Unit IDs
9NL5|1|R1|G|1666
9NL5|1|R1|G|1667
9NL5|1|R1|A|1668
9NL5|1|R1|A|1669
9NL5|1|R1|C|1670
9NL5|1|R1|U|1671
9NL5|1|R1|A|1672
9NL5|1|R1|G|1673
9NL5|1|R1|G|1674
*
9NL5|1|R1|C|1990
9NL5|1|R1|U|1991
9NL5|1|R1|G|1992
9NL5|1|R1|U|1993
9NL5|1|R1|C|1994
Current chains
- Chain R1
- 23S ribosomal RNA
Nearby chains
- Chain 14
- 50S ribosomal protein L14
- Chain 3
- 50S ribosomal protein L3
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