IL_9NLB_041

3D structure

PDB id

9NLB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUG*CAUC

Length

8 nucleotides

Bulged bases

9NLB|1|R1|U|1061

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9NLB_041 not in the Motif Atlas

Homologous match to IL_5J7L_285

Geometric discrepancy: 0.5373

The information below is about IL_5J7L_285

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_92446.2

Basepair signature

cWW-cWW-R-L-L

Number of instances in this motif group

5

Unit IDs

9NLB|1|R1|G|1059
9NLB|1|R1|U|1060
9NLB|1|R1|U|1061
9NLB|1|R1|G|1062
*
9NLB|1|R1|C|1076
9NLB|1|R1|A|1077
9NLB|1|R1|U|1078
9NLB|1|R1|C|1079

Current chains

Chain R1

23S ribosomal RNA

Nearby chains