IL_9NLE_034
3D structure
- PDB id
- 9NLE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli initiation complex with EQ2-EttA in Hydrolytic 1 conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 9NLE|1|R1|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NLE_034 not in the Motif Atlas
- Homologous match to IL_7A0S_033
- Geometric discrepancy: 0.0998
- The information below is about IL_7A0S_033
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
9NLE|1|R1|C|998
9NLE|1|R1|U|999
9NLE|1|R1|A|1000
9NLE|1|R1|A|1001
9NLE|1|R1|G|1002
*
9NLE|1|R1|C|1153
9NLE|1|R1|G|1154
9NLE|1|R1|A|1155
9NLE|1|R1|A|1156
9NLE|1|R1|G|1157
Current chains
- Chain R1
- 23S ribosomal RNA
Nearby chains
- Chain 20
- Large ribosomal subunit protein bL20
- Chain 21
- Large ribosomal subunit protein bL21
- Chain 30
- 50S ribosomal protein L30
- Chain R2
- 5S ribosomal RNA; 5S rRNA
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