IL_9NLH_046
3D structure
- PDB id
- 9NLH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli Initiation complex with YheS-EQ2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUU*AC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NLH_046 not in the Motif Atlas
- Geometric match to IL_8P9A_417
- Geometric discrepancy: 0.153
- The information below is about IL_8P9A_417
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_50694.7
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 27
Unit IDs
9NLH|1|R1|G|1310
9NLH|1|R1|G|1311
9NLH|1|R1|U|1312
9NLH|1|R1|U|1313
*
9NLH|1|R1|A|1603
9NLH|1|R1|C|1604
Current chains
- Chain R1
- 23S ribosomal RNA
Nearby chains
- Chain 23
- Large ribosomal subunit protein uL23
- Chain 34
- 50S ribosomal protein L34
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