IL_9NO7_083
3D structure
- PDB id
- 9NO7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site 2'-deoxy-A76-fMEAAAKC-peptidyl-tRNAcys at 2.13A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.13 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NO7_083 not in the Motif Atlas
- Geometric match to IL_9DFE_089
- Geometric discrepancy: 0.0723
- The information below is about IL_9DFE_089
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.3
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 47
Unit IDs
9NO7|1|A|C|2350
9NO7|1|A|G|2351
9NO7|1|A|A|2352
9NO7|1|A|G|2353
*
9NO7|1|A|C|2364
9NO7|1|A|G|2365
9NO7|1|A|A|2366
9NO7|1|A|G|2367
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L27
- Chain 8
- 50S ribosomal protein L35
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