3D structure

PDB id
9O2X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (S)-betahydroxyBocK charged NH-tRNAPyl
Experimental method
ELECTRON MICROSCOPY
Resolution
2.29 Å

Loop

Sequence
CUAAG*CGAAG
Length
10 nucleotides
Bulged bases
9O2X|1|a|A|1156
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9O2X|1|a|C|998
9O2X|1|a|U|999
9O2X|1|a|A|1000
9O2X|1|a|A|1001
9O2X|1|a|G|1002
*
9O2X|1|a|C|1153
9O2X|1|a|G|1154
9O2X|1|a|A|1155
9O2X|1|a|A|1156
9O2X|1|a|G|1157

Current chains

Chain a
23S rRNA

Nearby chains

Chain b
5S ribosomal RNA; 5S rRNA
Chain p
50S ribosomal protein L20
Chain q
Large ribosomal subunit protein bL21
Chain y
50S ribosomal protein L30

Coloring options:

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