3D structure

PDB id
9O2X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (S)-betahydroxyBocK charged NH-tRNAPyl
Experimental method
ELECTRON MICROSCOPY
Resolution
2.29 Å

Loop

Sequence
AUAAGUAA*UGAAAUU
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9O2X|1|a|A|1262
9O2X|1|a|U|1263
9O2X|1|a|A|1264
9O2X|1|a|A|1265
9O2X|1|a|G|1266
9O2X|1|a|U|1267
9O2X|1|a|A|1268
9O2X|1|a|A|1269
*
9O2X|1|a|U|2011
9O2X|1|a|G|2012
9O2X|1|a|A|2013
9O2X|1|a|A|2014
9O2X|1|a|A|2015
9O2X|1|a|U|2016
9O2X|1|a|U|2017

Current chains

Chain a
23S rRNA

Nearby chains

Chain e
Large ribosomal subunit protein uL4
Chain r
Large ribosomal subunit protein uL22
Chain z
50S ribosomal protein L32

Coloring options:

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