IL_9O2X_121

3D structure

PDB id

9O2X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (S)-betahydroxyBocK charged NH-tRNAPyl

Experimental method

ELECTRON MICROSCOPY

Resolution

2.29 Å

Loop

Sequence

UG*CAAG

Length

6 nucleotides

Bulged bases

9O2X|1|a|A|1508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9O2X_121 not in the Motif Atlas

Geometric match to IL_8B0X_120

Geometric discrepancy: 0.3505

The information below is about IL_8B0X_120

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52564.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

9O2X|1|a|U|1481
9O2X|1|a|G|1482
*
9O2X|1|a|C|1507
9O2X|1|a|A|1508
9O2X|1|a|A|1509
9O2X|1|a|G|1510

Current chains

Chain a

23S rRNA

Nearby chains