3D structure

PDB id
9O2Y (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPyl
Experimental method
ELECTRON MICROSCOPY
Resolution
2.14 Å

Loop

Sequence
UUAAGUG*CUAAA
Length
12 nucleotides
Bulged bases
9O2Y|1|a|A|1143
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9O2Y|1|a|U|1018
9O2Y|1|a|U|1019
9O2Y|1|a|A|1020
9O2Y|1|a|A|1021
9O2Y|1|a|G|1022
9O2Y|1|a|U|1023
9O2Y|1|a|G|1024
*
9O2Y|1|a|C|1140
9O2Y|1|a|U|1141
9O2Y|1|a|A|1142
9O2Y|1|a|A|1143
9O2Y|1|a|A|1144

Current chains

Chain a
23S rRNA

Nearby chains

Chain 3
50S ribosomal protein L36
Chain i
Large ribosomal subunit protein uL13

Coloring options:

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