IL_9O2Y_139

3D structure

PDB id

9O2Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPyl

Experimental method

ELECTRON MICROSCOPY

Resolution

2.14 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O2Y|1|a|U|1851
9O2Y|1|a|U|1852
9O2Y|1|a|A|1853
9O2Y|1|a|A|1854
9O2Y|1|a|U|1855
9O2Y|1|a|U|1856
9O2Y|1|a|G|1857
9O2Y|1|a|A|1858
9O2Y|1|a|U|1859
9O2Y|1|a|G|1860
*
9O2Y|1|a|U|1882
9O2Y|1|a|U|1883
9O2Y|1|a|G|1884
9O2Y|1|a|A|1885
9O2Y|1|a|U|1886
9O2Y|1|a|C|1887
9O2Y|1|a|G|1888
9O2Y|1|a|A|1889
9O2Y|1|a|A|1890
9O2Y|1|a|G|1891

Current chains

Chain a

23S rRNA

Nearby chains