IL_9O3K_225

3D structure

PDB id

9O3K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMAC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

UAG*CAGG

Length

7 nucleotides

Bulged bases

9O3K|1|2A|G|1559

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9O3K_225 not in the Motif Atlas

Geometric match to IL_7A0S_052

Geometric discrepancy: 0.239

The information below is about IL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_14688.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

5

Unit IDs

9O3K|1|2A|U|1433
9O3K|1|2A|A|1434
9O3K|1|2A|G|1435
*
9O3K|1|2A|C|1557
9O3K|1|2A|A|1558
9O3K|1|2A|G|1559
9O3K|1|2A|G|1560

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains