IL_9O3W_178
3D structure
- PDB id
- 9O3W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.9 Å
Loop
- Sequence
- UCUAAG*CUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9O3W_178 not in the Motif Atlas
- Homologous match to IL_9PN5_147
- Geometric discrepancy: 0.0937
- The information below is about IL_9PN5_147
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61299.8
- Basepair signature
- cWW-cWH-R-L-cWW-L-L
- Number of instances in this motif group
- 5
Unit IDs
9O3W|1|S2|U|57
9O3W|1|S2|C|58
9O3W|1|S2|U|59
9O3W|1|S2|A|60
9O3W|1|S2|A|61
9O3W|1|S2|G|62
*
9O3W|1|S2|C|86
9O3W|1|S2|U|87
9O3W|1|S2|G|88
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SE
- Small ribosomal subunit protein eS4, X isoform
- Chain SG
- Small ribosomal subunit protein eS6
- Chain SY
- 40S ribosomal protein S24
Coloring options: