IL_9O3W_184

3D structure

PDB id

9O3W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.9 Å

Loop

Sequence

GGAUAAC*GCUAA(OMU)A(OMC)

Length

15 nucleotides

Bulged bases

9O3W|1|S2|OMU|172

QA status

Modified nucleotides: OMU, OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3W|1|S2|G|145
9O3W|1|S2|G|146
9O3W|1|S2|A|147
9O3W|1|S2|U|148
9O3W|1|S2|A|149
9O3W|1|S2|A|150
9O3W|1|S2|C|151
*
9O3W|1|S2|G|167
9O3W|1|S2|C|168
9O3W|1|S2|U|169
9O3W|1|S2|A|170
9O3W|1|S2|A|171
9O3W|1|S2|OMU|172
9O3W|1|S2|A|173
9O3W|1|S2|OMC|174

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SG

Small ribosomal subunit protein eS6

Chain SY

40S ribosomal protein S24