IL_9O3W_200

3D structure

PDB id

9O3W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.9 Å

Loop

Sequence

GAG*CGAGG(A2M)UC

Length

11 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3W|1|S2|G|563
9O3W|1|S2|A|564
9O3W|1|S2|G|565
*
9O3W|1|S2|C|585
9O3W|1|S2|G|586
9O3W|1|S2|A|587
9O3W|1|S2|G|588
9O3W|1|S2|G|589
9O3W|1|S2|A2M|590
9O3W|1|S2|U|591
9O3W|1|S2|C|592

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SJ

Small ribosomal subunit protein uS4

Chain Se

FAU ubiquitin-like and ribosomal protein S30