IL_9O3W_224

3D structure

PDB id

9O3W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.9 Å

Loop

Sequence

CGAU*GCAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3W|1|S2|C|1098
9O3W|1|S2|G|1099
9O3W|1|S2|A|1100
9O3W|1|S2|U|1101
*
9O3W|1|S2|G|1131
9O3W|1|S2|C|1132
9O3W|1|S2|A|1133
9O3W|1|S2|G|1134

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SA

Small ribosomal subunit protein uS2

Chain SB

Small ribosomal subunit protein eS1

Chain SN

Small ribosomal subunit protein uS15

Chain SR

Small ribosomal subunit protein eS17

Chain Sa

Small ribosomal subunit protein eS26