IL_9OFV_014
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- GUGAAAU*ACGGAUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9OFV_014 not in the Motif Atlas
- Geometric match to IL_8P9A_244
- Geometric discrepancy: 0.0602
- The information below is about IL_8P9A_244
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22311.1
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
9OFV|1|f|G|404
9OFV|1|f|U|405
9OFV|1|f|G|406
9OFV|1|f|A|407
9OFV|1|f|A|408
9OFV|1|f|A|409
9OFV|1|f|U|410
*
9OFV|1|i|A|13
9OFV|1|i|C|14
9OFV|1|i|G|15
9OFV|1|i|G|16
9OFV|1|i|A|17
9OFV|1|i|U|18
9OFV|1|i|C|19
Current chains
- Chain f
- 25S rRNA
- Chain i
- 5.8S rRNA
Nearby chains
- Chain 3
- 60S ribosomal protein L17-A
- Chain R
- Large ribosomal subunit protein eL32
- Chain l
- Large ribosomal subunit protein uL4A
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