IL_9OFV_051
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- GUG*CC
- Length
- 5 nucleotides
- Bulged bases
- 9OFV|1|f|U|1208
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9OFV_051 not in the Motif Atlas
- Geometric match to IL_8CRE_056
- Geometric discrepancy: 0.1796
- The information below is about IL_8CRE_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
9OFV|1|f|G|1207
9OFV|1|f|U|1208
9OFV|1|f|G|1209
*
9OFV|1|f|C|1296
9OFV|1|f|C|1297
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain 6
- 60S ribosomal protein L20-A
- Chain Z
- Ubiquitin-60S ribosomal protein L40
- Chain h
- 5S ribosomal RNA; 5S rRNA
- Chain q
- 60S ribosomal protein L9-A
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